Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919539.1_cds_XP_016468726.1_61331
CDS Infomation

[gene=LOC107791221] [db_xref=GeneID:107791221] [protein=ATP-dependent DNA helicase pif1-like] [partial=3'] [protein_id=XP_016468726.1] [location=complement(join(<2153..2226,5356..5451,6167..6262,6355..7701))] [gbkey=CDS]
Sequence

ATGCCAAGGCCTGTTTATAATACGGAAGAAGTTGATAACAATAATAGATTAATACGGGAT
GAATTGCGTTATAATAAACGCGCTTTGGCAGAGGAACATCAACAATTAGTAAAGAATTTG
ACAGATGAACAAAAGTCAGTTTATGAAAAAATAATAAGAGATGTGAATGAAGACAAAGGT
GGGTTTTTCTTTTTATATGGTTTTGGAGGAACGGACAAGACTTTTATTTGGAGAACTCTA
TCTTCTGCCATAAGATCTAGAGGAGATATTGTCTTAACTGTTGCATCTAGCGGGATTGCA
TCTTTGTTGTTACCAGGTGGTCGAACAGCTCATTCAAGATTTGTGATTCCTCTAAATGTA
ACTGAAGATTCAACATGTAATATAAAGCAAGGTACTACTTTAGCAAATTTAATTATTAAG
GCAAAGTTGATTATCTGGGATGAGGCACCCATGATGCATAGATATTGTTTTGAAGCTCTT
GATAAAACTTTAAGAGATATTCTTAGGTTTAAAGATGCATCCAATTTACACCGACCATTT
GGAGGTAAAACAATTGTTCTTGGTGGTGACTTCAGACAAATATTACATGTTATTCCAAAA
GGTAGTAGGCAAGATATTGTTAATGCTTCTCTCAATTCTTCTTATTTGTGGCCTCACTGT
CAACTGTTAAAGTTAACAAAGAACATGAGATTGCAAGGTAATGAAATAGGGACACATCTA
GATGAGTTGAGAGTTTTTTCAGATTGGATTTTGGTAATTGGCGATGGTATAGTTGGTACT
TCTGTTGATGGCAATAAAAAAGTCCAAATACCAGATGATCTTTTGATAAAACAATTCGTT
GATCCAACATCTGCAATTGTAGAAAGTACGTATCCGAATTTCAACAGTCGTTGCAATGAT
ATAGGATACCTACAACAAAGAGCCATTCTTACTCCAACTCTTGATATGGTGGAATCAATC
AACGAATATATGATTTCCCTTAATGAAAGTTCTGAGAAATCATATTTGAGTTCCGATACA
ATCTGGAACTCTAACAGTACTTATTCAGCACTGGAACATGTACACACTCCTGAATTCTTA
AATACAATTAAATGTTCTGGAGTTCCAAATCATGCTCTTACGCTAAAGGTTGGTATTCCA
GTAATGTTATTAAGAAATATTGATCAGTCAGCAGGATTATGTAATGGAACAAGGTTGATC
ATAACTAAACTTGGAAATCAAGTTATTGAAGCAAAGGTTTTAGCGGGACAGATGGTTGGA
CAGAAAATGTTTATTCCAAGAATGACATCGACGCCATCTGATGCTAGAATTCCATTCAAG
TTCCAGCGAAGACAATTTCCAATCATTCTATATGTTGCTCTTTCTCGAGTGACGAGTAGA
AAGGGATTAAAAATATTGGTTTGTGATGACGATGGGAATATAACTACTGAAGCTACAAAT
GTTGTCATTACAGGGATTGCTTTGCCATCAGGCTCGGATAAGCTTTATTCAGGGAGTACG
GACAAGATAGTAAGAGTGTGGGATTGCCAATCTGGACAGATAATAAACAAGGAGAACTTC
CAATTACTACAAATGCGACTTCTCGAAGTCAAGGAACGGGACAATGTAGAAGG

Peptide Sequence

PEP ID

XP_016468726.1
PEP Infomation

PREDICTED: ATP-dependent DNA helicase pif1-like, partial [Nicotiana tabacum]
Sequence

MPRPVYNTEEVDNNNRLIRDELRYNKRALAEEHQQLVKNLTDEQKSVYEKIIRDVNEDKG
GFFFLYGFGGTDKTFIWRTLSSAIRSRGDIVLTVASSGIASLLLPGGRTAHSRFVIPLNV
TEDSTCNIKQGTTLANLIIKAKLIIWDEAPMMHRYCFEALDKTLRDILRFKDASNLHRPF
GGKTIVLGGDFRQILHVIPKGSRQDIVNASLNSSYLWPHCQLLKLTKNMRLQGNEIGTHL
DELRVFSDWILVIGDGIVGTSVDGNKKVQIPDDLLIKQFVDPTSAIVESTYPNFNSRCND
IGYLQQRAILTPTLDMVESINEYMISLNESSEKSYLSSDTIWNSNSTYSALEHVHTPEFL
NTIKCSGVPNHALTLKVGIPVMLLRNIDQSAGLCNGTRLIITKLGNQVIEAKVLAGQMVG
QKMFIPRMTSTPSDARIPFKFQRRQFPIILYVALSRVTSRKGLKILVCDDDGNITTEATN
VVITGIALPSGSDKLYSGSTDKIVRVWDCQSGQIINKENFQLLQMRLLEVKERDNVEG

Transcript Sequence

Gene sequence data has not been registered.